rs7549136 chr1:215114305 G>A
- Sequence
actaatgtagaaaacatgaggaaa[G/A]gtgccaagttcattttcagcgctg
- ASB in cell types
- T47D (invasive ductal carcinoma) ZR-75-1 (invasive ductal carcinoma) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- FOXA1_HUMAN PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.93 | 1.23 | 2.12 | n/a | No Hit | |||
| PRGR_HUMAN | -0.67 | 1.57 | 1.83 | n/a | No Hit |
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