rs75518884 chr6:31795967 G>A
- Sequence
ggcaccttgtgcgggtcctcggcc[G/A]ggtggcgagggcggcgcccagcgg
- ASB in cell types
- CD14+ monocytes PC9 (lung adenocarcinoma)
- ASB for transcription factors
- STAT1_HUMAN BC11B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.92 | n/a | 2.50 | n/a | No Hit | |||
| BC11B_HUMAN | 1.61 | -1.41 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood