rs75523 chr6:23566428 C>G
- Sequence
ctgttaggcgcaaaactacgacca[C/G]aacccagtatcctctattccctgc
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.07 | 1.81 | 2.37 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.09 | 2.08 | 2.23 | n/a | No Hit | |||
| ERG_HUMAN | -3.80 | 2.20 | 2.50 | n/a | No Hit |
Items per page:
1 – 3 of 3