rs756792 chr19:19120395 A>C
- Sequence
acctcctgctcagatcctgcctca[A/C]tacatgccctgccccctccccagg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- SP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP2_HUMAN | 1.83 | -2.08 | 1.33 | 3.47 | Discordant |
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Motif analysis
Genetic associations
GRASP body mass index (bmi), fasting insulin, hdl cholesterol change with statins, homa-b, homa-ir, microalbuminuria, parkinsons disease, serum creatinine
GTEx eQTL Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid