rs756871 chr7:107744010 A>G
- Sequence
gcctgagtccctcacaggagttgg[A/G]tagtagaggcgagagaaggaagtc
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) fetal bone marrow-derived mononuclear cells MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- JUN_HUMAN KMT2A_HUMAN CLOCK_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.18 | -0.13 | 2.00 | n/a | No Hit | |||
| KMT2A_HUMAN | 2.33 | n/a | 1.50 | n/a | n/a | |||
| CLOCK_HUMAN | n/a | 2.47 | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 0.15 | 1.30 | 1.67 | n/a | No Hit | |||
| AFF1_HUMAN | -1.04 | 0.96 | 1.42 | n/a | n/a |
Items per page:
1 – 5 of 6