ADASTRA v1.6.10
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rs757091
chr11:2419759
G
>
A
Sequence
tatgaatattatttacacactagc[G/A]ttttcttagtaagtccagcttttg
ASB in cell types
foreskin keratinocyte
OCI-LY7 (diffuse large B-cell lymphoma)
ASB for transcription factors
CTCF_HUMAN
SMC3_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.57
0.32
1.6·10
-5
1.00
1.34
n/a
No Hit
SMC3_HUMAN
1.59
-0.31
4.3·10
-3
1.00
1.17
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
hdl cholesterol
,
rheumatoid arthritis
,
type 2 diabetes
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)