Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs757596 chr19:28409075 C>G

Sequence
acaaatgaggataacgcagagtta[C/G]ggtagttagtgcagaagaaaaaac
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN HDAC1_HUMAN HDAC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN 2.62 n/a 6.6·10-61.00 2.50 n/a n/a
HDAC1_HUMAN 2.82 n/a 2.6·10-51.00 2.00 n/a n/a
HDAC2_HUMAN 1.99 -1.60 0.011.00 2.00 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP neuroticism
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia

Download