rs757654 chr14:72514209 T>C
- Sequence
ccgggaactaaaccaagtttaagc[T/C]ctgctgcctacgtctctggttgac
- ASB in cell types
- A549 (lung carcinoma) HeLa S3 (cervical adenocarcinoma) erythroid progenitors MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.59 | 1.00 | 1.54 | n/a | No Hit | |||
| SMC3_HUMAN | -0.30 | 1.08 | 1.93 | n/a | n/a | |||
| RAD21_HUMAN | 0.19 | 1.21 | 1.85 | n/a | n/a |
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