rs757660 chr22:30397148 G>A
- Sequence
gcagagtcggcgatctgagcccca[G/A]gcagaaggaggcattggccaaggt
- ASB in cell types
- HEK293 (embryonic kidney) HCT-116 (colon carcinoma)
- ASB for transcription factors
- ZBT20_HUMAN ZFX_HUMAN ZBT17_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT20_HUMAN | 2.67 | n/a | 2.00 | n/a | n/a | |||
| ZFX_HUMAN | 1.34 | -1.00 | 1.00 | n/a | No Hit | |||
| ZBT17_HUMAN | 2.48 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, hip bone mineral density (bmd), ldl cholesterol, mitral annular calcium, spine bone mineral density (bmd), total cholesterol, total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood