rs757693 chr7:44848430 G>A
- Sequence
gctaataaggtgaagcgattgcag[G/A]cgctgtggctttcccgcccattcg
- ASB in cell types
- HEK293 (embryonic kidney) thymus-derived CD34- cells LNCaP (prostate carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- ZBT17_HUMAN ZFHX2_HUMAN ZN335_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT17_HUMAN | -2.04 | 1.85 | 1.33 | n/a | No Hit | |||
| ZFHX2_HUMAN | -2.32 | 2.12 | 1.33 | n/a | n/a | |||
| ZN335_HUMAN | -2.64 | 2.32 | 1.50 | n/a | No Hit | |||
| RAD21_HUMAN | -1.51 | 1.77 | 1.00 | n/a | n/a | |||
| FEZF1_HUMAN | -2.54 | 2.04 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP college completion, mitral annular calcium, obesity with early age of onset (age >2), total cholesterol change with statins, triglycerides change with statins
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Muscle_Skeletal, Testis, Thyroid, Whole_Blood