rs7578655 chr2:47760185 C>A
- Sequence
gtgcgggatacgttttgtctctgt[C/A]tatgtacatcctgcttttcagtaa
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.38 | -0.23 | 1.94 | -0.32 | Weak Concordant | |||
| FOXA1_HUMAN | 1.92 | -0.40 | 1.89 | n/a | No Hit |
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Motif analysis
