rs758095 chr19:42919760 A>T
- Sequence
tccttcaccttccagccccgtgag[A/T]cccagtctttgtggctgtacgttc
- ASB in cell types
- HepG2 (hepatoblastoma) PC9 (lung adenocarcinoma)
- ASB for transcription factors
- MNT_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 2.08 | n/a | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 1.33 | -1.01 | 2.28 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Amygdala, Brain_Hippocampus, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood