rs758191 chr16:1929830 G>T
- Sequence
aggccccccgccgcgcctgcgcac[G/T]cagaccacccggcctggcagcacc
- ASB in cell types
- HCC1954 (ductal breast carcinoma) cranial neural crest cells CD34+ hematopoietic stem cells
- ASB for transcription factors
- CTCF_HUMAN NRF1_HUMAN AP2A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.96 | 0.27 | 1.59 | n/a | No Hit | |||
| NRF1_HUMAN | 1.65 | 0.62 | 1.75 | 2.30 | Discordant | |||
| AP2A_HUMAN | 2.05 | -1.88 | 2.00 | n/a | No Hit |
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Motif analysis
