rs758192 chr16:1929854 C>G
- Sequence
gcagaccacccggcctggcagcac[C/G]gagcgagcgtgccccctgctggtc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) suprapubic skin
- ASB for transcription factors
- RAD21_HUMAN SKIL_HUMAN MYC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.60 | 1.30 | 1.81 | n/a | n/a | |||
| SKIL_HUMAN | -2.17 | 2.39 | 2.00 | n/a | n/a | |||
| MYC_HUMAN | 1.15 | -0.48 | 1.72 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Esophagus_Gastroesophageal_Junction, Liver, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg