rs7584810 chr2:200303049 G>A
- Sequence
gcagcactaggaagaaaagaatgc[G/A]gtgactgatgtcccaactcttaac
- ASB in cell types
- HepG2 (hepatoblastoma) A549 (lung carcinoma)
- ASB for transcription factors
- CREB1_HUMAN FOXA2_HUMAN NC2A_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | -0.19 | 1.63 | 2.00 | n/a | No Hit | |||
| FOXA2_HUMAN | n/a | 2.56 | 2.00 | n/a | No Hit | |||
| NC2A_HUMAN | -3.20 | 2.43 | 2.00 | n/a | n/a | |||
| CEBPA_HUMAN | -1.54 | 1.85 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood