ADASTRA v1.6.10
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rs75857264
chr10:5283345
C
>
T
Sequence
gggttcactgtcctgcaccttcca[C/T]cctcctgctgagtcaggccgcagc
ASB in cell types
K562 (myelogenous leukemia)
A549 (lung carcinoma)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.77
-0.24
1.0·10
-4
1.00
1.97
A549 (lung carcinoma)
-0.37
0.63
1.00
2.3·10
-3
2.00
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Mucosa
,
Skin_Sun_Exposed_Lower_leg
,
Small_Intestine_Terminal_Ileum
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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