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rs7593215 chr2:188364410 G>C

Sequence
aatactaccacgctcatggtagta[G/C]gctgtcagccttcgcatctgtgta
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.41 0.29 3.1·10-31.00 1.93 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol
GTEx eQTL Adipose_Subcutaneous Brain_Nucleus_accumbens_basal_ganglia Colon_Sigmoid Esophagus_Gastroesophageal_Junction Heart_Left_Ventricle

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