rs75955852 chr5:55689902 T>C
- Sequence
taatgagacaggaagaaaagatga[T/C]aaagcaaaactagcttccaggcaa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.56 | 1.94 | 1.75 | n/a | No Hit | |||
| ANDR_HUMAN | 0.99 | 0.95 | 1.64 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Minor_Salivary_Gland, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis