rs7599678 chr2:227657294 G>A
- Sequence
ggcttcatctaccctaagtgctca[G/A]gcagcgtttggagaaggaagaagg
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- GCR_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.66 | 1.58 | 2.43 | n/a | No Hit | |||
| EP300_HUMAN | -0.87 | 1.27 | 2.20 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, late onset alzheimers disease, refractive error, sporadic creutzfeldt-jakob disease, waist hip ratio