rs75999757 chr12:48988358 C>T
- Sequence
ccccgggctgcagccatccttctt[C/T]ctgtatgtctgaactgcattgtta
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.13 | 0.38 | 1.54 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood