ADASTRA v1.6.10
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rs760762
chr20:41147406
C
>
T
Sequence
tctggcctgagaactggtctacac[C/T]ggaagcatgaagctccatacaatc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma)
0.90
0.21
7.5·10
-8
1.00
1.49
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
age-related disease endophenotypes
,
age-related diseases, mortality and associated endophenotypes
GRASP
biploar disorder (bipolar schizoaffective disorder)
,
chronic kidney disease
,
ldl cholesterol
,
total cholesterol
Finemapping
ldl cholesterol
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Colon_Sigmoid
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Pancreas
,
Pituitary
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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