rs761079 chr1:167645438 A>G
- Sequence
ggtggtggtgccaagagataagat[A/G]tgtccccagataaagcaggacaca
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN NFIC_HUMAN TAL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.00 | -0.42 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.47 | -0.51 | 2.07 | n/a | No Hit | |||
| NFIC_HUMAN | 2.77 | n/a | 3.00 | n/a | No Hit | |||
| TAL1_HUMAN | 2.58 | 0.74 | 2.17 | 2.04 | Discordant | |||
| MTG16_HUMAN | 2.98 | n/a | 3.00 | n/a | n/a |
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Motif analysis
