rs7611467 chr3:107421316 C>T
- Sequence
aactttcacattcaaaagcggcac[C/T]tttgttgatctccgagagctctgg
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte GM12878 (female B-cells) VCaP (prostate carcinoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN SMC3_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -0.17 | 1.01 | 1.84 | n/a | n/a | |||
| CTCF_HUMAN | 0.69 | 0.64 | 1.47 | n/a | No Hit | |||
| SMC3_HUMAN | -0.23 | 0.99 | 2.05 | n/a | n/a | |||
| FOXK2_HUMAN | -1.64 | 1.92 | 1.33 | n/a | n/a | |||
| FOXA1_HUMAN | 1.67 | -0.19 | 2.00 | n/a | No Hit |
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