rs762083 chr14:37594804 G>C
- Sequence
gcaccgagaaggcgcccccggccc[G/C]cctgcctgccttgcctggcgccca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CHD1_HUMAN SMCE1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CHD1_HUMAN | n/a | 3.23 | 1.50 | n/a | n/a | |||
| SMCE1_HUMAN | -2.59 | 2.08 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Pancreas, Prostate, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Whole_Blood