rs7621133 chr3:195423254 T>C
- Sequence
acacataaagcaaatgtgccaaaa[T/C]agtaacaaccggtaactctagatg
- ASB in cell types
- LHSAR (prostate epithelial cells)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.88 | n/a | 3.00 | 2.60 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Colon_Transverse, Esophagus_Mucosa, Lung, Minor_Salivary_Gland, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid