rs76396283 chr7:151350459 A>G
- Sequence
gggcactggagttaccgctagacg[A/G]gggagccctctagtggccctgttc
- ASB in cell types
- A549 (lung carcinoma) CD34+ stem cells-derived erythroblasts H929 (plasma cell myeloma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.59 | 0.52 | 1.73 | 2.28 | Discordant | |||
| RAD21_HUMAN | 1.85 | -0.76 | 2.00 | n/a | n/a | |||
| SMC3_HUMAN | 1.50 | -0.85 | 2.00 | n/a | n/a |
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Motif analysis
