rs76400633 chr7:4641825 T>C
- Sequence
tgcgcaagcgcaggaggagcagcg[T/C]ggcgcaaccttaaggcgcatgcgc
- ASB in cell types
- HepG2 (hepatoblastoma) MDA-MB-453 (breast adenocarcinoma) U2OS (osteosarcoma)
- ASB for transcription factors
- NRF1_HUMAN BMAL1_HUMAN MYC_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 1.78 | -2.00 | 1.33 | 1.55 | Weak Discordant | |||
| BMAL1_HUMAN | -0.92 | 1.90 | 2.00 | n/a | No Hit | |||
| MYC_HUMAN | 1.37 | -1.12 | 1.42 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.45 | -1.23 | 1.33 | n/a | No Hit |
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Motif analysis
