rs764408 chr2:229587251 C>T
- Sequence
gacggcaggggtttcagctgtagt[C/T]tgagcagtgaaagaaacgcttagg
- ASB in cell types
- lymphoblastoid cells Jurkat (T-cells) erythroid progenitors
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.13 | 0.65 | 1.71 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP diabetic retinopathy in type 2 diabetes mellitus, ldl cholesterol, total cholesterol, triglycerides