rs766360 chr3:143001506 G>A
- Sequence
acgtgagcggctgcccctaaggtc[G/A]ctatctcgacagtcgactattcag
- ASB in cell types
- HEK293T (embryonic kidney) HepG2 (hepatoblastoma) thymus-derived CD34+ cells MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- NR2F6_HUMAN STAT1_HUMAN COT1_HUMAN BC11B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2F6_HUMAN | -1.78 | 2.37 | 1.33 | n/a | n/a | |||
| STAT1_HUMAN | -2.76 | 2.59 | 2.50 | n/a | No Hit | |||
| COT1_HUMAN | -2.74 | 2.42 | 1.67 | n/a | No Hit | |||
| BC11B_HUMAN | -0.54 | 2.96 | 1.75 | n/a | n/a | |||
| AP2A_HUMAN | n/a | 2.69 | 2.00 | n/a | No Hit |
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Motif analysis
