ADASTRA v1.6.10
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rs76675039
chr20:50805155
G
>
A
Sequence
aagtgtataatttaatggcttttc[G/A]catgttcacagagttgtacaacca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CHD1_HUMAN
SMCE1_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CHD1_HUMAN
n/a
2.56
1.00
0.03
4.00
n/a
n/a
SMCE1_HUMAN
n/a
2.36
1.00
0.03
4.00
n/a
n/a
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Lung
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)