rs7671178 chr4:184268684 C>T
- Sequence
cccaactctatctaacaagggtga[C/T]tccagaacaaagttatgacataaa
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- ZN592_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN592_HUMAN | -0.54 | 1.86 | 1.42 | n/a | n/a | |||
| FOXK2_HUMAN | -0.68 | 1.37 | 1.78 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, lp-pla2 activity, lp-pla2 mass, triglycerides