rs767119 chr12:8077393 G>C
- Sequence
ttaagcagcggagagtcacaaagg[G/C]tgagtcattgctgtaaatctccct
- ASB in cell types
- HEK293 (embryonic kidney) coronary artery smooth muscle
- ASB for transcription factors
- JUND_HUMAN JUN_HUMAN PRDM6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUND_HUMAN | 1.85 | -2.12 | 1.33 | -2.90 | Concordant | |||
| JUN_HUMAN | 2.28 | -2.08 | 1.33 | -1.92 | Weak Concordant | |||
| PRDM6_HUMAN | 2.11 | n/a | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
