ADASTRA v1.6.10
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rs767455
chr12:6341779
T
>
C
Sequence
tccctttgtccctggtctcaccag[T/C]ggcagcagcaggtcaggcacggtg
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
COT1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN
-1.55
1.73
1.00
0.04
1.33
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
fasting insulin
,
homa-b
,
primary biliary cirrhosis
Finemapping
ankylosing spondylitis
GTEx eQTL
Artery_Tibial
,
Heart_Atrial_Appendage
,
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)