rs76812529 chr21:8993058 T>C
- Sequence
cggcatccctgtgggtgacactac[T/C]ggtgtgacattgctagcatgaccc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) HCT-116 (colon carcinoma)
- ASB for transcription factors
- ZFX_HUMAN HIF1A_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -1.67 | 2.24 | 2.42 | n/a | No Hit | |||
| HIF1A_HUMAN | 2.33 | -2.17 | 2.00 | n/a | No Hit | |||
| HDAC1_HUMAN | n/a | 1.95 | 2.50 | n/a | n/a |
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