rs768128 chr15:63402939 T>G
- Sequence
ccagagaagaaactcaccaaattc[T/G]gcaggttaaaaacgataaaaaata
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) neural cell
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 0.04 | 0.73 | 1.70 | |||
| neural cell | 0.61 | -0.48 | 1.00 |
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Motif analysis
No data available
Genetic associations
GRASP height, late onset alzheimers disease, ldl cholesterol, longstanding arthritis, mitral annular calcium, spine bone mineral density (bmd), systolic blood pressure (sbp), triglycerides, years of education
GTEx eQTL Adipose_Subcutaneous, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid