rs7681299 chr4:184937833 C>T
- Sequence
ctttataaggcaaaatttccacct[C/T]ggcatcatttcatataaacattta
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.35 | 0.88 | 2.03 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.28 | 1.25 | 1.71 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, chronic kidney disease, fasting blood glucose, homa-b, refractive error