ADASTRA v1.6.10
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rs768529
chr1:51769069
T
>
A
Sequence
aacaaggctttagattctttcagg[T/A]tgggtatgctgactccccagttcc
ASB in cell types
HEK293 (embryonic kidney)
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.69
-0.19
1.7·10
-6
0.98
1.98
K562 (myelogenous leukemia)
0.44
0.50
0.03
6.3·10
-4
1.27
Items per page:
5
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Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
body mass index (bmi)
,
infant head circumference
,
parkinsons disease
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Cerebellum
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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