rs768759 chr18:74803883 G>A
- Sequence
caaaaaggtcaggaatgacggagc[G/A]aaaaatgttcacgagaatgcttta
- ASB in cell types
- K562 (myelogenous leukemia) gastroesophageal sphincter
- ASB for transcription factors
- NFE2_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFE2_HUMAN | -1.69 | 1.76 | 1.33 | 2.34 | Concordant | |||
| EP300_HUMAN | -1.62 | 1.90 | 1.50 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Testis