rs7690600 chr4:131430500 C>T
- Sequence
caccagcctcaccagctccacctt[C/T]tgaccaacataaaagcccaatacc
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.43 | -0.07 | 1.78 | -3.10 | Concordant |
Items per page:
1 – 1 of 1
Motif analysis
Genetic associations
GRASP biploar disorder (bipolar schizoaffective disorder), diabetic retinopathy in type 2 diabetes mellitus, fasting blood glucose, fasting insulin, homa-ir, rheumatoid arthritis, total cholesterol, type 2 diabetes, combined control dataset