rs770086 chr12:89354098 C>T
- Sequence
aaaagtgccgaagcctgcccctcc[C/T]gagcggaaaaccacctgtgtgcgg
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) HEK293T (embryonic kidney) CWR22 (prostate carcinoma)
- ASB for transcription factors
- GLIS1_HUMAN ANDR_HUMAN GABPA_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | -1.79 | 2.01 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 1.17 | -0.15 | 1.70 | n/a | No Hit | |||
| GABPA_HUMAN | 1.19 | -0.99 | 1.39 | -1.19 | Weak Concordant |
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Motif analysis
