rs7702363 chr5:2038741 G>C
- Sequence
cgggccgggccgggtcagggtcag[G/C]atctgacccgagtctgggtcaagc
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) HepG2 (hepatoblastoma) breast tumor tissue
- ASB for transcription factors
- ESR1_HUMAN CTCF_HUMAN RXRB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.38 | -3.52 | 2.00 | 4.15 | Discordant | |||
| CTCF_HUMAN | 0.90 | 0.55 | 1.66 | n/a | No Hit | |||
| RXRB_HUMAN | -2.00 | 2.16 | 1.33 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
