rs77152071 chr19:8085946 C>G
- Sequence
ccgtcagtgccgcaggccccgtcc[C/G]tgccttggagggctcccagacagt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EGR1_HUMAN HDAC1_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | 1.95 | -0.29 | 2.00 | -4.32 | Concordant | |||
| HDAC1_HUMAN | 1.56 | -0.67 | 2.00 | n/a | n/a | |||
| REQU_HUMAN | 1.68 | -0.98 | 2.00 | n/a | n/a |
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Motif analysis
