rs772557 chr12:62910804 A>G
- Sequence
ttatctgaagaatcagaccaagcc[A/G]ttggagcaccagccagcaaatctg
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ hematopoietic stem cells-derived proerythroblasts VCaP (prostate carcinoma)
- ASB for transcription factors
- REQU_HUMAN MTA2_HUMAN NCOA1_HUMAN GATA1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | n/a | 3.63 | 2.25 | n/a | n/a | |||
| MTA2_HUMAN | n/a | 3.52 | 4.00 | n/a | n/a | |||
| NCOA1_HUMAN | n/a | 3.19 | 2.00 | n/a | n/a | |||
| GATA1_HUMAN | 2.61 | 2.18 | 2.12 | n/a | No Hit | |||
| TAL1_HUMAN | 1.05 | 2.08 | 3.00 | n/a | No Hit |
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