rs772558 chr12:62910849 C>G
- Sequence
tctgaggtatacaaagcagctgcc[C/G]gcaaggaagcttactctagttcag
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ hematopoietic stem cells-derived proerythroblasts VCaP (prostate carcinoma)
- ASB for transcription factors
- CTBP1_HUMAN SMCE1_HUMAN NCOA1_HUMAN GATA1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTBP1_HUMAN | n/a | 3.11 | 2.00 | n/a | n/a | |||
| SMCE1_HUMAN | n/a | 3.02 | 2.00 | n/a | n/a | |||
| NCOA1_HUMAN | n/a | 2.64 | 2.00 | n/a | n/a | |||
| GATA1_HUMAN | -1.30 | 1.57 | 2.12 | n/a | No Hit | |||
| MTA2_HUMAN | n/a | 2.80 | 4.00 | n/a | n/a |
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