rs774032 chr12:56430423 T>C
- Sequence
tctgtcacccaggctggagtgtaa[T/C]gatgcaatcatagcacactggagc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF4_HUMAN | 3.07 | n/a | 2.00 | -5.25 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Muscle_Skeletal, Small_Intestine_Terminal_Ileum, Testis, Whole_Blood