rs774203 chr16:84881943 A>T
- Sequence
agagcaggcttcatgactaagctt[A/T]tctccccccatcttttttctttcc
- ASB in cell types
- K562 (myelogenous leukemia) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- ZN316_HUMAN NFE2_HUMAN GATA3_HUMAN TAF9B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN316_HUMAN | n/a | 1.13 | 3.00 | n/a | n/a | |||
| NFE2_HUMAN | n/a | 1.45 | 2.50 | n/a | No Hit | |||
| GATA3_HUMAN | 2.02 | 0.93 | 1.67 | -2.17 | Concordant | |||
| TAF9B_HUMAN | n/a | 2.79 | 2.50 | n/a | n/a | |||
| HDAC1_HUMAN | -3.40 | 1.89 | 2.67 | n/a | n/a |
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Motif analysis
