rs7743830 chr6:11013987 A>G
- Sequence
cagaattctctgcgaaataaccct[A/G]gatccacttccagaacaactcctt
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.41 | n/a | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, hdl cholesterol change with statins, plasma docosahexaenoic acid levels, plasma docosapentaenoic acid levels, plasma eicosapentaenoic acid levels, total cholesterol change with statins, triglycerides change with statins
GTEx eQTL Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Colon_Sigmoid, Esophagus_Muscularis, Heart_Left_Ventricle, Liver, Muscle_Skeletal, Prostate, Testis, Whole_Blood