Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs774902 chr19:39121916 C>T

Sequence
ttggctcactgcaacctccacctc[C/T]ggattccagcgattctcctgcctc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
EGR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EGR1_HUMAN 1.50 -1.38 0.031.00 2.00 -3.43 Concordant
Items per page:
1 – 1 of 1

Motif analysis

EGR1_HUMAN Concordant
EGR1_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Cells_Cultured_fibroblasts Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

Download