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rs775250 chr12:57583257 C>A

Sequence
cctcggaccagcctcaggttgctt[C/A]ccttcttgctgacagcctctttgg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.48 0.77 1.000.02 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) hdl cholesterol ldl cholesterol partial epilepsy paternal transmission distortion sarcoidosis triglycerides waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Coronary Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Breast_Mammary_Tissue Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Testis Thyroid Whole_Blood

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