rs77535137 chr16:28554124 G>A
- Sequence
aggtggcgacgggccgtggcctga[G/A]acctccggcgaaacgcgggagcga
- ASB in cell types
- foreskin keratinocyte breast tumor tissue cranial neural crest cells
- ASB for transcription factors
- CTCF_HUMAN ESR1_HUMAN AP2A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.64 | 0.53 | 1.38 | n/a | No Hit | |||
| ESR1_HUMAN | 1.65 | n/a | 2.50 | n/a | No Hit | |||
| AP2A_HUMAN | 2.16 | -2.83 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Esophagus_Mucosa, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood